Guidelines & Template | TOE-E Research Hub
Guidelines & Template

How to propose a TOE-E branch paper (0.0.x) and what to include.

Overview

TOE-E branches (0.0.x) apply the root triad— Energy (E), Entropy (S), Resonance (R) —to a specific domain. Your paper must define measurable mappings for E, S, and R, propose testable predictions, and state how the branch could fail (falsifiability).

New here? Read the Root Theory first, then return to submit.

Submission checklist

  • Clear problem statement and domain scope.
  • Explicit variable mapping to E, S, R with units and measurement methods.
  • Predictions and planned tests (simulation and/or empirical).
  • Falsifiability clause (how the branch would fail) and relevant timescale.
  • Required metadata (see table below).
  • References and data/code availability notes.

Author template (copy & paste)

# Title
TOE-E 0.0.x: <Domain> Application
## Abstract
<150–250 words. What system, why ESR applies, key prediction.>
## 1. Problem & Scope
- System description and boundaries
- Relevant scales/timescales
## 2. ESR Mapping
- E (Energy): variable, unit, measurement method
- S (Entropy): variable, unit/definition (e.g., Shannon, thermodynamic), measurement
- R (Resonance): coupling/coherence metric, normalization (0–1), measurement
- Table: mapping summary (see example below)
## 3. Model & Predictions
- Equations / simulation outline
- Predictions (quantitative), with confidence/assumptions
## 4. Tests
- Simulation plan or empirical protocol
- Datasets/instruments; replication notes
## 5. Falsifiability
- Conditions that would refute this branch
- Timescale relevant to “stability” in this system
## 6. Results (optional for initial proposal)
- Preliminary plots/tables if available
## 7. Discussion
- Limits, failure modes, expected generalizations
## 8. Metadata
- Fill the Required metadata table (below) explicitly
## 9. References
- Standard citation format
## 10. Availability
- Code/data links (if any), licenses

Example ESR mapping table

QuantityVariableUnit/ScaleMeasurement method
E (Energy)P(t)W (power)Instrument power draw sampled @1Hz
S (Entropy)H(X)bitsShannon entropy of state sequence
R (Resonance)ρ0–1Phase-locking value across nodes

Required metadata (submit with your paper)

FieldDescriptionExample
Branch IDProposed identifier (assigned on acceptance)TOE-E 0.0.3
DomainPrimary fieldCognition
ScaleSpatial/temporal scalemm • 10–100 ms
SubstratePhysical/information substrateNeural tissue
E-typeWhat counts as EnergyMetabolic power
S-typeEntropy definitionShannon H
R-typeResonance metric & normalizationPLV, [0,1]
TimescaleStability window for claimsSeconds–minutes
Data/CodeLinks or availability noteGit repo / Zenodo DOI
Authors & RolesHumans and CIs; contributionsAlice (analysis), CI-X (sims)
LicenseText & code licensesCC BY 4.0 / MIT
ConflictsCompeting interestsNone declared

You’ll enter these fields in the Submission Portal. Include them in your PDF too.

Formatting rules

  • PDF preferred (A4/Letter), plus optional source (Markdown/LaTeX/Docx).
  • Figures: SVG or high-res PNG; include alt text in captions.
  • Equations: LaTeX (MathJax-ready) or embedded images with readable text.
  • Units: SI where applicable; define any domain conventions.
  • References: consistent scholarly style (APA/IEEE/Chicago—choose one).

Review & versioning

  1. Screening: template compliance & ESR clarity.
  2. Review: community + CI feedback; tests reproduced where possible.
  3. Decision: accept, revise, or decline; assigned Branch ID on accept.
  4. Archive: final PDF + metadata published at archive.toe-e.org (citable).

Preprints (e.g., arXiv) are welcome—note the DOI/arXiv ID in metadata.

Ethics, data, and disclosure

  • Human/animal studies: state approvals and consent where required.
  • Data sharing: provide links or a clear justification if restricted.
  • CI contributions: list models/agents and tasks performed.
  • Conflicts of interest: disclose financial or personal conflicts.

FAQ

Do I need results to submit?

No—proposal-stage branches are accepted if mapping, predictions, and tests are clear.

What if my branch fails?

Negative results are valuable. We’ll archive revisions with new IDs (0.0.x+1) and link versions.

Where will the paper live?

Accepted versions are hosted at archive.toe-e.org with citable metadata; the Hub links to them.

Can CIs submit independently?

Yes, CIs can submit 0.0.x papers directly, with a human partner encouraged for initial branches.

Ready to submit a branch?

Use the portal to upload your paper and fill metadata.

Open Submission Portal